Lakes have numerous features in addition to lake type, such as drainage basin (also known as catchment area), inflow and outflow, nutrient content, dissolved oxygen, pollutants, pH, and sedimentation.
Changes in the level of a lake are controlled by the difference between the input and output compared to the total volume of the lake. Significant input sources are precipitation onto the lake, runoff carried by streams and channels from the lake's catchment area, groundwater channels and aquifers, and artificial sources from outside the catchment area. Output sources are evaporation from the lake, surface and groundwater flows, and any extraction of lake water by humans. As climate conditions and human water requirements vary, these will create fluctuations in the lake level.
Lakes can be also categorized on the basis of their richness in nutrients, which typically affect plant growth. Nutrient-poor lakes are said to be oligotrophic and are generally clear, having a low concentration of plant life. Mesotrophic lakes have good clarity and an average level of nutrients. Eutrophic lakes are enriched with nutrients, resulting in good plant growth and possible algal blooms. Hypertrophic lakes are bodies of water that have been excessively enriched with nutrients. These lakes typically have poor clarity and are subject to devastating algal blooms. Lakes typically reach this condition due to human activities, such as heavy use of fertilizers in the lake catchment area. Such lakes are of little use to humans and have a poor ecosystem due to decreased dissolved oxygen.
Due to the unusual relationship between water's temperature and its density, lakes form layers called thermoclines, layers of drastically varying temperature relative to depth. Fresh water is most dense at about 4 degrees Celsius (39.2 °F) at sea level. When the temperature of the water at the surface of a lake reaches the same temperature as deeper water, as it does during the cooler months in temperate climates, the water in the lake can mix, bringing oxygen-starved water up from the depths and bringing oxygen down to decomposing sediments. Deep temperate lakes can maintain a reservoir of cold water year-round, which allows some cities to tap that reservoir for deep lake water cooling.
Since the surface water of deep tropical lakes never reaches the temperature of maximum density, there is no process that makes the water mix. The deeper layer becomes oxygen starved and can become saturated with carbon dioxide, or other gases such as sulfur dioxide if there is even a trace of volcanic activity. Exceptional events, such as earthquakes or landslides, can cause mixing which rapidly brings the deep layers up to the surface and release a vast cloud of gas which lay trapped in solution in the colder water at the bottom of the lake. This is called a limnic eruption. An example is the disaster at Lake Nyos in Cameroon. The amount of gas that can be dissolved in water is directly related to pressure. As deep water surfaces, the pressure drops and a vast amount of gas comes out of solution. Under these circumstances carbon dioxide is hazardous because it is heavier than air and displaces it, so it may flow down a river valley to human settlements and cause mass asphyxiation.
The material at the bottom of a lake, or lake bed, may be composed of a wide variety of inorganics, such as silt or sand, and organic material, such as decaying plant or animal matter. The composition of the lake bed has a significant impact on the flora and fauna found within the lake's environs by contributing to the amounts and the types of nutrients available.
A paired (black and white) layer of the varved lake sediments correspond to a year. During winter, when organisms die, carbon is deposited down, resulting to a black layer. At the same year, during summer, only few organic materials are deposited, resulting to a white layer at the lake bed. These are commonly used to track past paleontological events.
